Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | CSX01_04865 | Not Available | Negative | 1058618 - 1059718 | 42181.6 |
| rna-binding protein | CSX01_04870 | Not Available | Negative | 1059708 - 1059923 | 7914.47 |
| dna polymerase iii subunit beta | CSX01_04875 | Not Available | Negative | 1059923 - 1061038 | 41484.3 |
| chromosomal replication initiator protein dnaa | CSX01_04880 | Not Available | Negative | 1061309 - 1062694 | 52635.8 |
| 50s ribosomal protein l34 | CSX01_04885 | Not Available | Positive | 1063165 - 1063299 | 5046.39 |
| ribonuclease p protein component | CSX01_04890 | Not Available | Positive | 1063348 - 1063686 | 12989.7 |
| membrane protein insertion efficiency factor yidd | CSX01_04895 | Not Available | Positive | 1063707 - 1063919 | 8000.1 |
| stage iii sporulation protein j | CSX01_04900 | Not Available | Positive | 1064013 - 1065215 | 44823.8 |
| dna-binding protein | CSX01_04905 | Not Available | Positive | 1065231 - 1065860 | 23371.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CSX01_04910 | Not Available | Positive | 1066026 - 1067396 | 50409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
