Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | CSX01_04715 | Not Available | Positive | 1022580 - 1023869 | 49712.7 |
| hypothetical protein | CSX01_04720 | Not Available | Negative | 1023861 - 1026041 | 79729.3 |
| hypothetical protein | CSX01_04725 | Not Available | Negative | 1026038 - 1026403 | 14167.7 |
| hypothetical protein | CSX01_04730 | Not Available | Negative | 1026431 - 1028851 | 88657.8 |
| hypothetical protein | CSX01_04735 | Not Available | Negative | 1028860 - 1030479 | 63111.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | CSX01_04740 | Not Available | Negative | 1030513 - 1031367 | 31541.2 |
| hydrolase tatd | CSX01_04745 | Not Available | Negative | 1031370 - 1032155 | 29747.2 |
| methionine--trna ligase | CSX01_04750 | Not Available | Negative | 1032310 - 1034283 | 73547.9 |
| zinc-ribbon domain-containing protein | CSX01_04755 | Not Available | Negative | 1034294 - 1034650 | 13354.9 |
| sodium:proton exchanger | CSX01_04760 | Not Available | Negative | 1034714 - 1035694 | 34232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
