Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_04400 | Not Available | Positive | 945296 - 945943 | 25618.4 |
| atp-dependent dna helicase pcra | CSX01_04405 | Not Available | Positive | 946112 - 948448 | 86760.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | CSX01_04410 | Not Available | Positive | 948516 - 949901 | 50912.9 |
| radical sam protein | CSX01_04415 | Not Available | Positive | 949947 - 950825 | 33889.0 |
| hypothetical protein | CSX01_04420 | Not Available | Negative | 950916 - 951032 | 4438.44 |
| xre family transcriptional regulator | CSX01_04425 | Not Available | Positive | 951245 - 951592 | 12890.5 |
| hypothetical protein | CSX01_04430 | Not Available | Positive | 951698 - 952228 | 20223.8 |
| lsa family abc-f type ribosomal protection protein | CSX01_04435 | Not Available | Positive | 952645 - 954177 | 58565.3 |
| hypothetical protein | CSX01_04440 | Not Available | Positive | 954279 - 955106 | 31532.4 |
| dna-binding response regulator | CSX01_04445 | Not Available | Positive | 955204 - 955860 | 24898.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
