Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | CSX01_04350 | Not Available | Positive | 934001 - 935401 | 53363.0 |
| aspartate--ammonia ligase | CSX01_04355 | Not Available | Positive | 935694 - 936704 | 38376.6 |
| trpr yerc/yecd | CSX01_04360 | Not Available | Positive | 936972 - 937262 | 11049.0 |
| ion transporter | CSX01_04365 | Not Available | Negative | 937308 - 938036 | 27779.1 |
| anthranilate phosphoribosyltransferase | CSX01_04370 | Not Available | Positive | 938692 - 939753 | 37779.4 |
| indole-3-glycerol phosphate synthase | CSX01_04375 | Not Available | Positive | 939763 - 940542 | 28928.0 |
| tryptophan synthase subunit beta | CSX01_04380 | Not Available | Positive | 940544 - 942334 | 65751.6 |
| tryptophan synthase subunit alpha | CSX01_04385 | Not Available | Positive | 942327 - 943100 | 27759.1 |
| anthranilate synthase component i | CSX01_04390 | Not Available | Positive | 943090 - 944598 | 55938.9 |
| aminodeoxychorismate/anthranilate synthase component ii | CSX01_04395 | Not Available | Positive | 944595 - 945161 | 20960.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
