Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | CSX01_04300 | Not Available | Positive | 920019 - 921455 | 54511.3 |
| dna-binding response regulator | CSX01_04305 | Not Available | Positive | 921468 - 923057 | 61237.2 |
| laci family transcriptional regulator | CSX01_04310 | Not Available | Positive | 923073 - 924104 | 37244.6 |
| abc transporter substrate-binding protein | CSX01_04315 | Not Available | Positive | 924300 - 925439 | 41008.7 |
| abc transporter atp-binding protein | CSX01_04320 | Not Available | Positive | 925655 - 927181 | 56125.0 |
| abc transporter permease | CSX01_04325 | Not Available | Positive | 927196 - 928365 | 41227.5 |
| abc transporter permease | CSX01_04330 | Not Available | Positive | 928422 - 929585 | 41357.2 |
| n-acetylmuramoyl-l-alanine amidase | CSX01_04335 | Not Available | Positive | 929841 - 930581 | 26613.3 |
| duf4317 domain-containing protein | CSX01_04340 | Not Available | Negative | 930750 - 931973 | 46498.1 |
| hypothetical protein | CSX01_04345 | Not Available | Positive | 932182 - 933654 | 53742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
