Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| act domain-containing protein | CSX01_04200 | Not Available | Positive | 886109 - 886384 | 10158.5 |
| pfl family protein | CSX01_04205 | Not Available | Positive | 886433 - 887797 | 48008.6 |
| diguanylate cyclase | CSX01_04210 | Not Available | Positive | 887990 - 890107 | 79604.0 |
| hybrid sensor histidine kinase/response regulator | CSX01_04215 | Not Available | Positive | 890135 - 893752 | 134193.0 |
| ld-carboxypeptidase | CSX01_04220 | Not Available | Positive | 893783 - 894814 | 37889.2 |
| hypothetical protein | CSX01_04225 | Not Available | Positive | 894934 - 895347 | 14893.3 |
| isoleucine--trna ligase | CSX01_04230 | Not Available | Positive | 895365 - 898523 | 120174.0 |
| glycogen phosphorylase | CSX01_04235 | Not Available | Positive | 898758 - 901214 | 95140.6 |
| hypothetical protein | CSX01_04240 | Not Available | Positive | 901220 - 902116 | 33298.8 |
| hypothetical protein | CSX01_04245 | Not Available | Positive | 902249 - 903292 | 38362.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
