Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_04100 | Not Available | Negative | 862589 - 864442 | 70137.9 |
| hypothetical protein | CSX01_04105 | Not Available | Positive | 864660 - 866516 | 70855.6 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit beta | CSX01_04110 | Not Available | Positive | 866532 - 867200 | 24265.9 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | CSX01_04115 | Not Available | Positive | 867218 - 868084 | 30232.0 |
| phosphatidic acid phosphatase | CSX01_04120 | Not Available | Negative | 868053 - 868778 | 27169.1 |
| hypothetical protein | CSX01_04125 | Not Available | Positive | 868903 - 870528 | 61447.1 |
| duf3737 domain-containing protein | CSX01_04130 | Not Available | Positive | 870618 - 871511 | 34076.1 |
| cystathionine beta-lyase | CSX01_04135 | Not Available | Positive | 871526 - 872695 | 43897.2 |
| pyrroloquinoline quinone biosynthesis protein pqqd | CSX01_04140 | Not Available | Negative | 872761 - 873099 | 12971.4 |
| oligopeptide transporter, opt family | CSX01_04145 | Not Available | Negative | 873089 - 874969 | 64490.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
