Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | CSX01_04000 | Not Available | Positive | 842291 - 844492 | 83239.4 |
| sugar abc transporter substrate-binding protein | CSX01_04005 | Not Available | Positive | 844628 - 845926 | 47078.8 |
| sugar abc transporter permease | CSX01_04010 | Not Available | Positive | 846073 - 846891 | 30922.8 |
| carbohydrate abc transporter permease | CSX01_04015 | Not Available | Positive | 846896 - 847726 | 31165.7 |
| alpha-galactosidase | CSX01_04020 | Not Available | Positive | 847739 - 849850 | 78901.4 |
| hypothetical protein | CSX01_04025 | Not Available | Negative | 849894 - 850970 | 41570.3 |
| flavin reductase | CSX01_04030 | Not Available | Positive | 851797 - 852486 | 26516.4 |
| methylglyoxal synthase | CSX01_04035 | Not Available | Negative | 852562 - 853029 | 17117.7 |
| histidine phosphatase family protein | CSX01_04040 | Not Available | Negative | 853080 - 853862 | 29782.2 |
| hypothetical protein | CSX01_04045 | Not Available | Negative | 853902 - 854675 | 29767.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
