Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bmp family abc transporter substrate-binding protein | CSX01_03045 | Not Available | Positive | 629388 - 630461 | 37202.3 |
| yjji family glycine radical enzyme | CSX01_03050 | Not Available | Positive | 630569 - 632113 | 57673.0 |
| yjjw family glycine radical enzyme activase | CSX01_03055 | Not Available | Positive | 632115 - 632954 | 30957.9 |
| heme abc transporter atp-binding protein | CSX01_03060 | Not Available | Positive | 632998 - 634524 | 55839.6 |
| abc transporter permease | CSX01_03065 | Not Available | Positive | 634517 - 635557 | 36456.6 |
| abc transporter permease | CSX01_03070 | Not Available | Positive | 635557 - 636489 | 32504.5 |
| cytidine deaminase | CSX01_03075 | Not Available | Positive | 636504 - 636923 | 14973.8 |
| adenosine deaminase | CSX01_03080 | Not Available | Positive | 636942 - 637931 | 37107.5 |
| crp/fnr family transcriptional regulator | CSX01_03085 | Not Available | Positive | 637897 - 638676 | 30257.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CSX01_03095 | Not Available | Positive | 639673 - 640548 | 31372.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
