Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | CSX01_02995 | Not Available | Positive | 613213 - 614010 | 29321.9 |
| hypothetical protein | CSX01_03000 | Not Available | Negative | 614007 - 614795 | 28899.9 |
| hypothetical protein | CSX01_03005 | Not Available | Negative | 614839 - 617013 | 79845.8 |
| hypothetical protein | CSX01_03010 | Not Available | Negative | 617028 - 618326 | 49707.9 |
| hypothetical protein | CSX01_03015 | Not Available | Positive | 618982 - 620661 | 60710.6 |
| valine--trna ligase | CSX01_03020 | Not Available | Positive | 621275 - 623923 | 100868.0 |
| deoxyribose-phosphate aldolase | CSX01_03025 | Not Available | Positive | 624294 - 624971 | 24058.9 |
| duf342 domain-containing protein | CSX01_03030 | Not Available | Positive | 625102 - 626517 | 51114.8 |
| hypothetical protein | CSX01_03035 | Not Available | Positive | 626699 - 628096 | 51935.1 |
| c-di-gmp phosphodiesterase | CSX01_03040 | Not Available | Positive | 628111 - 629208 | 41102.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
