Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | CSX01_00040 | Not Available | Negative | 8641 - 11658 | 115513.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 11725 - 11927 | Not Available |
| carbohydrate abc transporter permease | CSX01_00045 | Not Available | Negative | 11679 - 12491 | 30537.3 |
| sugar abc transporter permease | CSX01_00050 | Not Available | Negative | 12505 - 13407 | 33307.5 |
| sugar abc transporter substrate-binding protein | CSX01_00055 | Not Available | Negative | 13477 - 14832 | 48954.2 |
| arac family transcriptional regulator | CSX01_00060 | Not Available | Negative | 15075 - 16010 | 36908.1 |
| sugar abc transporter substrate-binding protein | CSX01_00065 | Not Available | Negative | 16026 - 17348 | 48351.4 |
| aspartate aminotransferase | CSX01_00070 | Not Available | Negative | 17345 - 18562 | 45280.6 |
| ggdef domain-containing protein | CSX01_00075 | Not Available | Negative | 18613 - 19971 | 51409.8 |
| hypothetical protein | CSX01_00080 | Not Available | Negative | 20085 - 20996 | 33037.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
