Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | CSX01_02245 | Not Available | Negative | 435106 - 436395 | 48240.2 |
| replication-associated recombination protein a | CSX01_02250 | Not Available | Negative | 436419 - 437744 | 48731.8 |
| atp-dependent chaperone clpb | CSX01_02255 | Not Available | Negative | 437958 - 440540 | 96214.4 |
| hypothetical protein | CSX01_02260 | Not Available | Negative | 440684 - 441625 | 35812.7 |
| nudix hydrolase | CSX01_02265 | Not Available | Negative | 441625 - 442212 | 22279.0 |
| hypothetical protein | CSX01_02270 | Not Available | Positive | 442418 - 443188 | 28989.5 |
| hypothetical protein | CSX01_02275 | Not Available | Positive | 443337 - 444140 | 30881.1 |
| hsp20/alpha crystallin family protein | CSX01_02280 | Not Available | Positive | 444435 - 444875 | 16636.2 |
| dna alkylation repair protein | CSX01_02285 | Not Available | Negative | 444961 - 445647 | 27372.0 |
| gnat family n-acetyltransferase | CSX01_02290 | Not Available | Negative | 445656 - 446138 | 18710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
