Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate c-acetyltransferase | CSX01_02145 | Not Available | Positive | 414591 - 416849 | 84462.9 |
| pyruvate formate-lyase 1-activating enzyme | CSX01_02150 | Not Available | Positive | 417172 - 417906 | 27608.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | CSX01_02155 | Not Available | Negative | 417975 - 418466 | 18831.5 |
| 7-cyano-7-deazaguanine synthase quec | CSX01_02160 | Not Available | Negative | 418494 - 419180 | 24789.3 |
| gtp cyclohydrolase i fole | CSX01_02165 | Not Available | Negative | 419210 - 419782 | 21441.7 |
| putative 7-carboxy-7-deazaguanine synthase quee | CSX01_02170 | Not Available | Negative | 419794 - 420462 | 24920.8 |
| 6-carboxytetrahydropterin synthase qued | CSX01_02175 | Not Available | Negative | 420465 - 420887 | 16216.0 |
| citrate transporter | CSX01_02180 | Not Available | Negative | 421220 - 422335 | 41095.3 |
| hypothetical protein | CSX01_02185 | Not Available | Negative | 422417 - 423382 | 36846.1 |
| hypothetical protein | CSX01_02190 | Not Available | Negative | 423385 - 424200 | 30049.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
