Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 402137 - 402164 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 359 - 476 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 529 - 2071 | Not Available |
| dhh family phosphoesterase | CSX01_00005 | Not Available | Negative | 1 - 1913 | 72383.4 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | CSX01_00010 | Not Available | Positive | 2180 - 3286 | 41048.6 |
| hypothetical protein | CSX01_00015 | Not Available | Positive | 3450 - 4346 | 34322.8 |
| xylose isomerase | CSX01_00020 | Not Available | Negative | 4378 - 5694 | 49409.7 |
| arac family transcriptional regulator | CSX01_00025 | Not Available | Positive | 5828 - 6763 | 36147.6 |
| galactokinase | CSX01_00030 | Not Available | Negative | 6790 - 7959 | 42602.2 |
| hypothetical protein | CSX01_00035 | Not Available | Negative | 8012 - 8536 | 19500.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
