Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | CSX01_01700 | Not Available | Negative | 342799 - 343293 | 17958.8 |
| hypothetical protein | CSX01_01705 | Not Available | Negative | 343435 - 345426 | 75653.7 |
| nad(+) diphosphatase | CSX01_01710 | Not Available | Negative | 345544 - 346389 | 32446.8 |
| nadh:flavin oxidoreductase | CSX01_01715 | Not Available | Negative | 346523 - 348493 | 70828.5 |
| hypothetical protein | CSX01_01720 | Not Available | Positive | 348733 - 349983 | 48294.3 |
| aldo/keto reductase | CSX01_01725 | Not Available | Negative | 350021 - 351202 | 44845.0 |
| type ii toxin-antitoxin system rele/pare family toxin | CSX01_01730 | Not Available | Negative | 351525 - 351827 | 11583.0 |
| prevent-host-death protein | CSX01_01735 | Not Available | Negative | 351820 - 352083 | 10186.1 |
| hypothetical protein | CSX01_01740 | Not Available | Negative | 352333 - 353499 | 42821.9 |
| ion transporter | CSX01_01745 | Not Available | Negative | 353658 - 354383 | 27368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
