Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole synthase | CSX01_01445 | Not Available | Negative | 290084 - 290851 | 27456.6 |
| thiamine biosynthesis protein thif | CSX01_01450 | Not Available | Negative | 290900 - 291535 | 23215.1 |
| thiamine biosynthesis protein this | CSX01_01455 | Not Available | Negative | 291535 - 291729 | 6960.28 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | CSX01_01460 | Not Available | Negative | 291689 - 292528 | 29268.1 |
| thiamine phosphate synthase | CSX01_01465 | Not Available | Negative | 292541 - 293173 | 22747.6 |
| serine hydroxymethyltransferase | CSX01_01470 | Not Available | Negative | 293411 - 294667 | 45450.5 |
| diguanylate cyclase | CSX01_01475 | Not Available | Negative | 294735 - 297371 | 99538.6 |
| branched-chain amino acid aminotransferase | CSX01_01480 | Not Available | Negative | 297350 - 298414 | 40009.3 |
| hypothetical protein | CSX01_01485 | Not Available | Positive | 298636 - 300543 | 72726.2 |
| flavin reductase | CSX01_01490 | Not Available | Positive | 300559 - 301083 | 19888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
