Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_01280 | Not Available | Negative | 245365 - 248124 | 99435.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CSX01_01285 | Not Available | Negative | 248233 - 248811 | 21710.6 |
| glucose-1-phosphate thymidylyltransferase | CSX01_01290 | Not Available | Negative | 249158 - 250036 | 32163.8 |
| udp-galactopyranose mutase | CSX01_01295 | Not Available | Negative | 250037 - 251155 | 43023.9 |
| dtdp-glucose 4,6-dehydratase | CSX01_01300 | Not Available | Negative | 251337 - 252422 | 41644.0 |
| dtdp-4-dehydrorhamnose reductase | CSX01_01305 | Not Available | Negative | 252648 - 253511 | 32103.2 |
| 2-isopropylmalate synthase | CSX01_01310 | Not Available | Negative | 253521 - 255209 | 63527.5 |
| hpr family phosphocarrier protein | CSX01_01315 | Not Available | Negative | 255503 - 255769 | 9433.37 |
| phosphoglucosamine mutase | CSX01_01320 | Not Available | Negative | 255820 - 257169 | 48247.2 |
| hypothetical protein | CSX01_01325 | Not Available | Negative | 257191 - 258462 | 45397.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
