Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd-gyp domain-containing protein | CSX01_14595 | Not Available | Positive | 3068114 - 3069259 | 42587.9 |
| atp-dependent recd-like dna helicase | CSX01_14600 | Not Available | Negative | 3069249 - 3071489 | 83632.9 |
| hypothetical protein | CSX01_14605 | Not Available | Negative | 3071538 - 3071990 | 16450.1 |
| flagellar hook-basal body protein | CSX01_14610 | Not Available | Negative | 3072062 - 3072877 | 29244.8 |
| flagellar hook-basal body protein | CSX01_14615 | Not Available | Negative | 3073043 - 3073846 | 29255.1 |
| rod shape-determining protein | CSX01_14620 | Not Available | Negative | 3074002 - 3074985 | 34693.1 |
| carbohydrate abc transporter permease | CSX01_14625 | Not Available | Negative | 3075308 - 3076177 | 31728.2 |
| sugar abc transporter permease | CSX01_14630 | Not Available | Negative | 3076177 - 3077232 | 39212.1 |
| abc transporter substrate-binding protein | CSX01_14635 | Not Available | Negative | 3077347 - 3078633 | 46000.2 |
| laci family transcriptional regulator | CSX01_14640 | Not Available | Negative | 3078817 - 3079854 | 38865.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
