Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | CSX01_14445 | Not Available | Negative | 3033934 - 3034083 | 6052.46 |
| hypothetical protein | CSX01_14450 | Not Available | Negative | 3034271 - 3034957 | 23865.0 |
| carbohydrate abc transporter permease | CSX01_14455 | Not Available | Negative | 3035099 - 3035953 | 31640.6 |
| sugar abc transporter permease | CSX01_14460 | Not Available | Negative | 3036014 - 3036934 | 34505.5 |
| abc transporter substrate-binding protein | CSX01_14465 | Not Available | Negative | 3037029 - 3038432 | 51217.9 |
| laci family transcriptional regulator | CSX01_14470 | Not Available | Negative | 3038566 - 3039579 | 37795.1 |
| glycosyl transferase | CSX01_14475 | Not Available | Positive | 3039914 - 3042349 | 91564.7 |
| rna pseudouridine synthase | CSX01_14480 | Not Available | Positive | 3042473 - 3043357 | 33374.8 |
| molecular chaperone dnaj | CSX01_14485 | Not Available | Negative | 3043399 - 3043851 | 17962.1 |
| alpha-glycosidase | CSX01_14490 | Not Available | Negative | 3043955 - 3045988 | 77984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
