Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | CSX01_13595 | Not Available | Negative | 2861271 - 2863145 | 71652.9 |
| atp-dependent metallopeptidase hflb | CSX01_13600 | Not Available | Negative | 2863149 - 2865212 | 75884.5 |
| abc transporter atp-binding protein | CSX01_13605 | Not Available | Negative | 2865425 - 2866222 | 29027.4 |
| abc transporter permease | CSX01_13610 | Not Available | Negative | 2866215 - 2867144 | 32682.0 |
| abc transporter substrate-binding protein | CSX01_13615 | Not Available | Negative | 2867219 - 2868244 | 35677.4 |
| mate family efflux transporter | CSX01_13620 | Not Available | Negative | 2868387 - 2869754 | 49252.0 |
| 50s ribosomal protein l17 | CSX01_13625 | Not Available | Negative | 2869895 - 2870419 | 19788.3 |
| dna-directed rna polymerase subunit alpha | CSX01_13630 | Not Available | Negative | 2870555 - 2871514 | 35198.0 |
| 30s ribosomal protein s4 | CSX01_13635 | Not Available | Negative | 2871673 - 2872266 | 22890.8 |
| 30s ribosomal protein s11 | CSX01_13640 | Not Available | Negative | 2872283 - 2872675 | 13752.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
