Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_12510 | Not Available | Negative | 2660089 - 2660841 | 27704.7 |
| duf1292 domain-containing protein | CSX01_12515 | Not Available | Negative | 2660949 - 2661209 | 9822.51 |
| alpha-glycosidase | CSX01_12520 | Not Available | Negative | 2661300 - 2662994 | 66138.7 |
| sugar abc transporter permease | CSX01_12525 | Not Available | Negative | 2663052 - 2663897 | 31461.7 |
| sugar abc transporter permease | CSX01_12530 | Not Available | Negative | 2663894 - 2665318 | 53490.7 |
| sugar abc transporter substrate-binding protein | CSX01_12535 | Not Available | Negative | 2665439 - 2666728 | 45994.8 |
| laci family transcriptional regulator | CSX01_12540 | Not Available | Negative | 2666881 - 2667870 | 36155.7 |
| sam-dependent methyltransferase | CSX01_12545 | Not Available | Positive | 2668055 - 2668744 | 25740.4 |
| hypothetical protein | CSX01_12550 | Not Available | Positive | 2668799 - 2670346 | 57931.1 |
| nicotinate phosphoribosyltransferase | CSX01_12555 | Not Available | Negative | 2670499 - 2672001 | 55698.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
