Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | CSX01_12310 | Not Available | Negative | 2605623 - 2606147 | 19849.1 |
| c4-dicarboxylate abc transporter substrate-binding protein | CSX01_12315 | Not Available | Negative | 2606160 - 2607206 | 37917.6 |
| sugar kinase | CSX01_12320 | Not Available | Negative | 2607481 - 2608578 | 39863.4 |
| glucuronate isomerase | CSX01_12325 | Not Available | Negative | 2608604 - 2610004 | 53310.6 |
| mannitol dehydrogenase | CSX01_12330 | Not Available | Negative | 2610001 - 2611497 | 55704.0 |
| mannonate dehydratase | CSX01_12335 | Not Available | Negative | 2611502 - 2612575 | 40736.6 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | CSX01_12340 | Not Available | Negative | 2612575 - 2613216 | 22885.9 |
| arac family transcriptional regulator | CSX01_12345 | Not Available | Positive | 2613426 - 2614319 | 34807.2 |
| pyrroloquinoline quinone biosynthesis protein pqqe | CSX01_12350 | Not Available | Negative | 2614324 - 2615763 | 54609.2 |
| hypothetical protein | CSX01_12355 | Not Available | Negative | 2615919 - 2617088 | 45671.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
