Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CSX01_12210 | Not Available | Positive | 2589568 - 2590275 | 26695.4 |
| abc transporter atp-binding protein | CSX01_12215 | Not Available | Positive | 2590321 - 2591109 | 29518.7 |
| nitrogen fixation protein nifb | CSX01_12220 | Not Available | Positive | 2591471 - 2592742 | 47936.1 |
| hypothetical protein | CSX01_12225 | Not Available | Positive | 2592755 - 2593798 | 38807.0 |
| pyridoxamine 5'-phosphate oxidase | CSX01_12230 | Not Available | Positive | 2593811 - 2594245 | 16282.2 |
| hypothetical protein | CSX01_12235 | Not Available | Positive | 2594261 - 2595625 | 49305.2 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | CSX01_12240 | Not Available | Positive | 2595618 - 2596313 | 25657.1 |
| molybdenum abc transporter atp-binding protein | CSX01_12245 | Not Available | Positive | 2596335 - 2597405 | 40120.1 |
| nitrate abc transporter permease | CSX01_12250 | Not Available | Positive | 2597417 - 2598181 | 28316.5 |
| peptide-binding protein | CSX01_12255 | Not Available | Negative | 2598376 - 2598487 | 4107.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
