Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_12060 | Not Available | Positive | 2559821 - 2560900 | 42410.9 |
| dna repair protein rada | CSX01_12065 | Not Available | Positive | 2561089 - 2562474 | 49955.5 |
| hypothetical protein | CSX01_12070 | Not Available | Positive | 2562982 - 2563935 | 35849.4 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | CSX01_12075 | Not Available | Negative | 2564000 - 2565118 | 42170.1 |
| lysr family transcriptional regulator | CSX01_12080 | Not Available | Positive | 2565314 - 2566228 | 34739.7 |
| hypothetical protein | CSX01_12085 | Not Available | Positive | 2566352 - 2566735 | 13738.0 |
| hypothetical protein | CSX01_12090 | Not Available | Positive | 2566746 - 2567051 | 11656.5 |
| hypothetical protein | CSX01_12095 | Not Available | Negative | 2567126 - 2567710 | 21757.7 |
| rrf2 family transcriptional regulator | CSX01_12100 | Not Available | Negative | 2567861 - 2568262 | 15051.3 |
| arylesterase | CSX01_12105 | Not Available | Positive | 2568529 - 2569149 | 22669.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
