Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | CSX01_00980 | Not Available | Positive | 182361 - 183446 | 40556.9 |
| dna-binding response regulator | CSX01_00985 | Not Available | Positive | 183476 - 184213 | 28919.7 |
| accessory regulator agrb | CSX01_00990 | Not Available | Positive | 184227 - 184802 | 22045.9 |
| replicative dna helicase | CSX01_00995 | Not Available | Negative | 184838 - 186190 | 50699.8 |
| 50s ribosomal protein l9 | CSX01_01000 | Not Available | Negative | 186193 - 186639 | 16501.0 |
| dhh family phosphoesterase | CSX01_01005 | Not Available | Negative | 186636 - 186857 | 8150.88 |
| hypothetical protein | CSX01_01010 | Not Available | Positive | 186858 - 187858 | 38004.7 |
| hypothetical protein | CSX01_01015 | Not Available | Positive | 187872 - 189278 | 54761.1 |
| hypothetical protein | CSX01_01020 | Not Available | Positive | 189341 - 190027 | 26161.6 |
| epimerase | CSX01_01025 | Not Available | Positive | 190085 - 191089 | 37932.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
