Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ctp synthetase | CSX01_12010 | Not Available | Positive | 2546681 - 2548273 | 59290.7 |
| ncs2 family permease | CSX01_12015 | Not Available | Positive | 2548372 - 2549799 | 50309.1 |
| hypothetical protein | CSX01_12020 | Not Available | Positive | 2549928 - 2550122 | 7070.95 |
| hypothetical protein | CSX01_12025 | Not Available | Positive | 2550232 - 2551617 | 48704.9 |
| atp-dependent clp protease atp-binding subunit | CSX01_12030 | Not Available | Positive | 2551642 - 2554080 | 89766.4 |
| endosialidase | CSX01_12035 | Not Available | Positive | 2554175 - 2554588 | 14951.6 |
| mate family efflux transporter | CSX01_12040 | Not Available | Positive | 2555019 - 2556350 | 48902.6 |
| hypothetical protein | CSX01_12045 | Not Available | Positive | 2556340 - 2557311 | 37597.1 |
| hypothetical protein | CSX01_12050 | Not Available | Positive | 2557333 - 2557566 | 8733.26 |
| hypothetical protein | CSX01_12055 | Not Available | Positive | 2557572 - 2559779 | 83026.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
