Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_11245 | Not Available | Negative | 2383071 - 2383412 | 12648.2 |
| hypc/hybg/hupf family hydrogenase formation chaperone | CSX01_11250 | Not Available | Positive | 2383639 - 2383848 | 7352.98 |
| hydrogenase formation protein hypd | CSX01_11255 | Not Available | Positive | 2383848 - 2384888 | 37414.2 |
| hydrogenase expression/formation protein hype | CSX01_11260 | Not Available | Positive | 2384923 - 2385924 | 35550.1 |
| methyl-accepting chemotaxis protein | CSX01_11265 | Not Available | Positive | 2386052 - 2388043 | 72281.5 |
| sugar abc transporter substrate-binding protein | CSX01_11270 | Not Available | Positive | 2388058 - 2389056 | 36099.9 |
| response regulator | CSX01_11275 | Not Available | Positive | 2389157 - 2389540 | 13996.9 |
| rna methyltransferase | CSX01_11280 | Not Available | Positive | 2389848 - 2390996 | 43620.4 |
| cell surface protein | CSX01_11285 | Not Available | Positive | 2391001 - 2392725 | 64151.4 |
| n-acetylmuramoyl-l-alanine amidase | CSX01_11290 | Not Available | Positive | 2392730 - 2393794 | 39222.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
