Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ech hydrogenase subunit echb | CSX01_11195 | Not Available | Positive | 2372179 - 2373057 | 32616.8 |
| nadh-quinone oxidoreductase subunit nuob | CSX01_11200 | Not Available | Positive | 2373088 - 2373531 | 15605.8 |
| ech hydrogenase subunit d | CSX01_11205 | Not Available | Positive | 2373545 - 2373907 | 14366.2 |
| nadh-quinone oxidoreductase subunit d | CSX01_11210 | Not Available | Positive | 2373909 - 2374988 | 40627.4 |
| hydrogenase | CSX01_11215 | Not Available | Positive | 2375158 - 2375598 | 15744.9 |
| hypothetical protein | CSX01_11220 | Not Available | Positive | 2376434 - 2379034 | 96072.0 |
| glyoxalase | CSX01_11225 | Not Available | Positive | 2379098 - 2379460 | 14212.1 |
| dna-binding protein | CSX01_11230 | Not Available | Positive | 2379535 - 2380299 | 29167.9 |
| butanol dehydrogenase | CSX01_11235 | Not Available | Negative | 2380347 - 2381564 | 44390.4 |
| hypothetical protein | CSX01_11240 | Not Available | Negative | 2381649 - 2382914 | 47794.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
