Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase | CSX01_10840 | Not Available | Positive | 2302293 - 2303393 | 41160.7 |
| alpha/beta hydrolase | CSX01_10845 | Not Available | Positive | 2303365 - 2304141 | 28674.4 |
| iron abc transporter permease | CSX01_10850 | Not Available | Positive | 2304222 - 2304824 | 23557.0 |
| abc transporter atp-binding protein | CSX01_10855 | Not Available | Positive | 2304841 - 2306652 | 66339.8 |
| abc transporter atp-binding protein | CSX01_10860 | Not Available | Positive | 2306646 - 2308364 | 62621.6 |
| hypothetical protein | CSX01_10865 | Not Available | Positive | 2308438 - 2309205 | 29508.0 |
| mate family efflux transporter | CSX01_10870 | Not Available | Positive | 2309236 - 2310669 | 51293.8 |
| hypothetical protein | CSX01_10875 | Not Available | Positive | 2310781 - 2311407 | 24599.5 |
| hypothetical protein | CSX01_10880 | Not Available | Positive | 2311496 - 2312293 | 30819.3 |
| hypothetical protein | CSX01_10885 | Not Available | Negative | 2312415 - 2312642 | 8690.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
