Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqeg family had iiia-type phosphatase | CSX01_10685 | Not Available | Positive | 2261359 - 2261907 | 21005.5 |
| hypothetical protein | CSX01_10690 | Not Available | Positive | 2261947 - 2262300 | 13848.3 |
| ribose 5-phosphate isomerase b | CSX01_10695 | Not Available | Positive | 2262326 - 2262769 | 15693.8 |
| atp-dependent clp endopeptidase, proteolytic subunit clpp | CSX01_10705 | Not Available | Positive | 2264622 - 2265209 | 21578.1 |
| atp-dependent clp protease atp-binding subunit clpx | CSX01_10710 | Not Available | Positive | 2265258 - 2266550 | 47754.4 |
| yiha family ribosome biogenesis gtp-binding protein | CSX01_10715 | Not Available | Positive | 2266550 - 2267170 | 23056.6 |
| hypothetical protein | CSX01_10720 | Not Available | Positive | 2267170 - 2268195 | 37715.7 |
| metal abc transporter atp-binding protein | CSX01_10725 | Not Available | Positive | 2268369 - 2269133 | 28070.1 |
| metal abc transporter permease | CSX01_10730 | Not Available | Positive | 2269123 - 2269926 | 28921.3 |
| flagellar hook protein | CSX01_10735 | Not Available | Positive | 2270661 - 2272046 | 48500.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
