Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | CSX01_10630 | Not Available | Negative | 2253412 - 2253912 | 18700.3 |
| pspc domain-containing protein | CSX01_10635 | Not Available | Positive | 2254076 - 2254276 | 7104.82 |
| hypothetical protein | CSX01_10640 | Not Available | Positive | 2254289 - 2254504 | 7860.59 |
| transcriptional regulator | CSX01_10645 | Not Available | Positive | 2254688 - 2255746 | 40891.1 |
| hypothetical protein | CSX01_10655 | Not Available | Negative | 2256691 - 2257656 | 38532.4 |
| transposase | CSX01_10660 | Not Available | Negative | 2257653 - 2258342 | 27377.4 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | CSX01_10665 | Not Available | Positive | 2258407 - 2258955 | 20040.6 |
| hypothetical protein | CSX01_10670 | Not Available | Negative | 2259055 - 2260047 | 38593.3 |
| transcriptional repressor nrdr | CSX01_10675 | Not Available | Positive | 2260344 - 2260796 | 17318.8 |
| hypothetical protein | CSX01_10680 | Not Available | Positive | 2260912 - 2261295 | 14234.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
