Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CSX01_09765 | Not Available | Positive | 2073956 - 2075032 | 38687.8 |
| cobinamide kinase | CSX01_09770 | Not Available | Positive | 2075035 - 2075619 | 21954.1 |
| adenosylcobinamide-gdp ribazoletransferase | CSX01_09775 | Not Available | Positive | 2075616 - 2076377 | 28373.1 |
| hypothetical protein | CSX01_09780 | Not Available | Positive | 2076381 - 2076713 | 12423.1 |
| histidine phosphatase family protein | CSX01_09785 | Not Available | Positive | 2076710 - 2077288 | 21603.4 |
| cobalamin biosynthesis protein cobd | CSX01_09790 | Not Available | Positive | 2077230 - 2078216 | 35755.2 |
| thr-phospho decarboxylase | CSX01_09795 | Not Available | Positive | 2078230 - 2079273 | 39329.7 |
| dna polymerase iv | CSX01_09800 | Not Available | Positive | 2079263 - 2080507 | 46177.3 |
| hypothetical protein | CSX01_09805 | Not Available | Positive | 2080609 - 2081031 | 15936.7 |
| gntr family transcriptional regulator | CSX01_09810 | Not Available | Negative | 2081072 - 2082505 | 55505.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
