Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase-exonuclease addab subunit adda | CSX01_09610 | Not Available | Negative | 2038093 - 2041689 | 136150.0 |
| hypothetical protein | CSX01_09615 | Not Available | Negative | 2041692 - 2045129 | 130288.0 |
| metal-dependent hydrolase with the tim-barrel fold protein | CSX01_09620 | Not Available | Negative | 2045242 - 2046789 | 57285.5 |
| 6-phosphofructokinase | CSX01_09625 | Not Available | Negative | 2046816 - 2048060 | 45428.6 |
| hypothetical protein | CSX01_09630 | Not Available | Negative | 2048106 - 2048366 | 9461.84 |
| phosphatase pap2 family protein | CSX01_09635 | Not Available | Negative | 2048428 - 2048964 | 19575.8 |
| hypothetical protein | CSX01_09640 | Not Available | Negative | 2048968 - 2049501 | 19897.0 |
| nucleoside kinase | CSX01_09650 | Not Available | Negative | 2050311 - 2051975 | 63117.9 |
| hypothetical protein | CSX01_09655 | Not Available | Negative | 2051989 - 2052702 | 26315.1 |
| rna polymerase sigma factor rpod | CSX01_09660 | Not Available | Negative | 2052750 - 2053880 | 42911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
