Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | CSX01_09510 | Not Available | Negative | 2010235 - 2011383 | 42586.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | CSX01_09515 | Not Available | Negative | 2011387 - 2012523 | 42814.2 |
| shikimate dehydrogenase | CSX01_09520 | Not Available | Negative | 2012536 - 2013168 | 22695.4 |
| hypothetical protein | CSX01_09525 | Not Available | Negative | 2013189 - 2014493 | 51128.7 |
| hypothetical protein | CSX01_09530 | Not Available | Negative | 2014524 - 2015921 | 52771.3 |
| hypothetical protein | CSX01_09535 | Not Available | Negative | 2015962 - 2016570 | 22497.5 |
| hypothetical protein | CSX01_09540 | Not Available | Negative | 2016576 - 2017553 | 38631.1 |
| hypothetical protein | CSX01_09545 | Not Available | Negative | 2017613 - 2018788 | 46004.9 |
| hypothetical protein | CSX01_09550 | Not Available | Negative | 2018801 - 2019424 | 24138.0 |
| hypothetical protein | CSX01_09555 | Not Available | Negative | 2019408 - 2019736 | 12830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
