Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly scaffold protein nifu | CSX01_09255 | Not Available | Negative | 1956441 - 1956878 | 15858.7 |
| cysteine desulfurase nifs | CSX01_09260 | Not Available | Negative | 1956893 - 1958098 | 43522.7 |
| riboflavin transporter | CSX01_09265 | Not Available | Negative | 1958244 - 1958810 | 19626.6 |
| transcriptional regulator | CSX01_09270 | Not Available | Positive | 1958932 - 1960203 | 48351.0 |
| hypothetical protein | CSX01_09275 | Not Available | Negative | 1960194 - 1962311 | 78495.8 |
| hypothetical protein | CSX01_09280 | Not Available | Negative | 1962339 - 1963160 | 30137.8 |
| fe-s oxidoreductase | CSX01_09285 | Not Available | Positive | 1963816 - 1964946 | 42288.2 |
| tigr00268 family protein | CSX01_09290 | Not Available | Positive | 1964962 - 1965783 | 30929.1 |
| 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase | CSX01_09295 | Not Available | Positive | 1965787 - 1966530 | 25872.1 |
| tigr00299 family protein | CSX01_09300 | Not Available | Positive | 1966547 - 1967758 | 43587.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
