Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate racemase | CSX01_08600 | Not Available | Positive | 1830108 - 1830824 | 26484.3 |
| amp-dependent synthetase | CSX01_08605 | Not Available | Positive | 1830870 - 1832381 | 56549.0 |
| acyl carrier protein | CSX01_08610 | Not Available | Positive | 1832516 - 1832749 | 8487.79 |
| membrane-bound o-acyltransferase family protein | CSX01_08615 | Not Available | Positive | 1832753 - 1834345 | 61150.0 |
| hypothetical protein | CSX01_08620 | Not Available | Positive | 1834355 - 1835416 | 41382.4 |
| d-tyrosyl-trna(tyr) deacylase | CSX01_08625 | Not Available | Positive | 1835425 - 1835874 | 16501.0 |
| rpib/laca/lacb family sugar-phosphate isomerase | CSX01_08630 | Not Available | Positive | 1836096 - 1836557 | 16863.4 |
| citrate synthase | CSX01_08635 | Not Available | Negative | 1836614 - 1837987 | 51686.9 |
| phosphoenolpyruvate carboxykinase (atp) | CSX01_08640 | Not Available | Positive | 1838370 - 1839983 | 59499.3 |
| yihy/virulence factor brkb family protein | CSX01_08650 | Not Available | Positive | 1840575 - 1841444 | 33641.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
