Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase trua | CSX01_08400 | Not Available | Positive | 1785815 - 1786549 | 27650.2 |
| gntr family transcriptional regulator | CSX01_08405 | Not Available | Positive | 1786763 - 1787497 | 27745.4 |
| pts beta-glucoside transporter subunit iibca | CSX01_08410 | Not Available | Positive | 1787678 - 1789513 | 65241.8 |
| alpha,alpha-phosphotrehalase | CSX01_08415 | Not Available | Positive | 1789523 - 1791160 | 63596.2 |
| 50s ribosomal protein l13 | CSX01_08420 | Not Available | Positive | 1791364 - 1791792 | 16157.6 |
| 30s ribosomal protein s9 | CSX01_08425 | Not Available | Positive | 1791806 - 1792204 | 14658.0 |
| hypothetical protein | CSX01_08430 | Not Available | Positive | 1792234 - 1792548 | 12560.3 |
| aspartate racemase | CSX01_08435 | Not Available | Positive | 1792886 - 1793593 | 26561.2 |
| cpbp family intramembrane metalloprotease | CSX01_08440 | Not Available | Positive | 1793731 - 1794255 | 19134.8 |
| endonuclease v | CSX01_08445 | Not Available | Positive | 1794395 - 1795027 | 24003.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
