Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoylputrescine amidase | CSX01_08245 | Not Available | Negative | 1752744 - 1753619 | 33128.4 |
| agmatine deiminase | CSX01_08250 | Not Available | Negative | 1753640 - 1754743 | 41007.2 |
| carboxynorspermidine decarboxylase | CSX01_08255 | Not Available | Negative | 1754753 - 1755898 | 42550.1 |
| saccharopine dehydrogenase | CSX01_08260 | Not Available | Negative | 1755918 - 1757177 | 46809.8 |
| polyamine aminopropyltransferase | CSX01_08265 | Not Available | Negative | 1757193 - 1758065 | 33916.3 |
| arginine decarboxylase | CSX01_08270 | Not Available | Negative | 1758065 - 1759513 | 53235.3 |
| hypothetical protein | CSX01_08275 | Not Available | Negative | 1759642 - 1759831 | 6927.13 |
| hypothetical protein | CSX01_08280 | Not Available | Positive | 1759913 - 1760680 | 26630.3 |
| hypothetical protein | CSX01_08285 | Not Available | Negative | 1760736 - 1763297 | 92282.5 |
| hypothetical protein | CSX01_08290 | Not Available | Negative | 1763367 - 1764911 | 57299.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
