Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_07895 | Not Available | Negative | 1677731 - 1678249 | 19149.1 |
| type i 3-dehydroquinate dehydratase | CSX01_07900 | Not Available | Negative | 1678263 - 1679018 | 27560.9 |
| shikimate dehydrogenase | CSX01_07905 | Not Available | Positive | 1679164 - 1680024 | 31401.9 |
| 3-deoxy-7-phosphoheptulonate synthase | CSX01_07910 | Not Available | Positive | 1680026 - 1681057 | 38827.1 |
| hypothetical protein | CSX01_07915 | Not Available | Negative | 1681160 - 1681519 | 12757.7 |
| nudix hydrolase | CSX01_07920 | Not Available | Negative | 1681533 - 1682069 | 20422.3 |
| hypothetical protein | CSX01_07925 | Not Available | Negative | 1682096 - 1684429 | 86839.7 |
| ribonuclease y | CSX01_07930 | Not Available | Negative | 1685034 - 1686569 | 57189.7 |
| recombinase recx | CSX01_07935 | Not Available | Negative | 1686790 - 1687383 | 23011.3 |
| recombinase reca | CSX01_07940 | Not Available | Negative | 1687386 - 1688441 | 37798.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
