Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcfb family protein | CSX01_07845 | Not Available | Negative | 1667838 - 1668317 | 18348.5 |
| chromosome partitioning protein parb | CSX01_07850 | Not Available | Negative | 1668489 - 1669433 | 35749.8 |
| chromosome partitioning protein para | CSX01_07855 | Not Available | Negative | 1669393 - 1670214 | 30210.8 |
| replication initiator a domain-containing protein | CSX01_07860 | Not Available | Negative | 1670207 - 1671136 | 35975.5 |
| hypothetical protein | CSX01_07865 | Not Available | Negative | 1671170 - 1672240 | 39938.3 |
| homoserine o-succinyltransferase | CSX01_07870 | Not Available | Negative | 1672521 - 1673444 | 35828.3 |
| dna ligase (nad(+)) liga | CSX01_07875 | Not Available | Negative | 1673482 - 1675485 | 73476.4 |
| 23s rrna pseudouridine synthase f | CSX01_07880 | Not Available | Negative | 1675522 - 1676244 | 27273.2 |
| sh3 domain-containing protein | CSX01_07885 | Not Available | Negative | 1676315 - 1677592 | 47049.3 |
| Trna-arg | Not Available | Not Available | Positive | 1677614 - 1677687 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
