Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | CSX01_07595 | Not Available | Negative | 1623793 - 1624878 | 40239.2 |
| argininosuccinate lyase | CSX01_07600 | Not Available | Negative | 1625036 - 1626409 | 50873.9 |
| hypothetical protein | CSX01_07605 | Not Available | Negative | 1626412 - 1627056 | 25526.1 |
| hypothetical protein | CSX01_07610 | Not Available | Negative | 1627056 - 1627403 | 12687.3 |
| Trna-thr | Not Available | Not Available | Positive | 1627605 - 1627677 | Not Available |
| spermidine/putrescine abc transporter atp-binding protein | CSX01_07620 | Not Available | Positive | 1627705 - 1628805 | 41476.1 |
| abc transporter permease | CSX01_07625 | Not Available | Positive | 1628798 - 1629625 | 30252.1 |
| abc transporter permease | CSX01_07630 | Not Available | Positive | 1629622 - 1630410 | 28973.1 |
| spermidine/putrescine abc transporter substrate-binding protein | CSX01_07635 | Not Available | Positive | 1630410 - 1631477 | 41139.2 |
| hypothetical protein | CSX01_07640 | Not Available | Negative | 1631525 - 1631995 | 17846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
