Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | CSX01_07390 | Not Available | Negative | 1574873 - 1575928 | 39240.8 |
| peptidase u32 | CSX01_07395 | Not Available | Negative | 1575988 - 1577214 | 46252.8 |
| methyltransferase | CSX01_07400 | Not Available | Negative | 1577214 - 1577858 | 24279.2 |
| ribonuclease j | CSX01_07405 | Not Available | Negative | 1577860 - 1579536 | 61464.1 |
| hypothetical protein | CSX01_07410 | Not Available | Negative | 1579581 - 1579844 | 9868.12 |
| holliday junction resolvase ruvx | CSX01_07415 | Not Available | Negative | 1579944 - 1580363 | 15856.2 |
| duf965 domain-containing protein | CSX01_07420 | Not Available | Negative | 1580363 - 1580629 | 10117.0 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | CSX01_07425 | Not Available | Negative | 1580739 - 1582064 | 49420.0 |
| pts sugar transporter | CSX01_07430 | Not Available | Positive | 1582178 - 1582408 | 8493.17 |
| trna 4-thiouridine(8) synthase thii | CSX01_07435 | Not Available | Negative | 1582465 - 1583646 | 44148.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
