Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna processing protein rimm | CSX01_07140 | Not Available | Negative | 1522704 - 1523222 | 19345.2 |
| rna-binding protein | CSX01_07145 | Not Available | Negative | 1523290 - 1523526 | 8382.38 |
| 30s ribosomal protein s16 | CSX01_07150 | Not Available | Negative | 1523555 - 1523797 | 8918.8 |
| signal recognition particle protein | CSX01_07155 | Not Available | Negative | 1523844 - 1525181 | 48495.6 |
| dna-binding protein | CSX01_07160 | Not Available | Negative | 1525185 - 1525520 | 12790.2 |
| threonine ammonia-lyase | CSX01_07165 | Not Available | Negative | 1525601 - 1526812 | 43754.8 |
| signal recognition particle-docking protein ftsy | CSX01_07170 | Not Available | Negative | 1526854 - 1527780 | 33802.4 |
| chromosome segregation protein smc | CSX01_07175 | Not Available | Negative | 1527793 - 1531353 | 133998.0 |
| ribonuclease iii | CSX01_07180 | Not Available | Negative | 1531377 - 1532078 | 26429.5 |
| acyl carrier protein | CSX01_07185 | Not Available | Negative | 1532211 - 1532447 | 8558.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
