Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | CSX01_06840 | Not Available | Negative | 1450816 - 1451931 | 40788.4 |
| hypothetical protein | CSX01_06845 | Not Available | Negative | 1451931 - 1452611 | 25181.4 |
| peptidoglycan glycosyltransferase | CSX01_06850 | Not Available | Negative | 1452631 - 1455414 | 103363.0 |
| rod shape-determining protein mred | CSX01_06855 | Not Available | Negative | 1455467 - 1455982 | 19586.7 |
| rod shape-determining protein mrec | CSX01_06860 | Not Available | Negative | 1456005 - 1456868 | 31363.0 |
| rod shape-determining protein | CSX01_06865 | Not Available | Negative | 1456883 - 1457899 | 37016.6 |
| hypothetical protein | CSX01_06870 | Not Available | Negative | 1457946 - 1459292 | 48662.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CSX01_06875 | Not Available | Negative | 1459234 - 1460172 | 35769.1 |
| dna mismatch repair protein mutl | CSX01_06880 | Not Available | Negative | 1460172 - 1462100 | 72081.8 |
| dna mismatch repair protein muts | CSX01_06885 | Not Available | Negative | 1462100 - 1464691 | 97433.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
