Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | CSX01_06790 | Not Available | Positive | 1442545 - 1443609 | 40887.1 |
| rlua family pseudouridine synthase | CSX01_06795 | Not Available | Negative | 1443648 - 1444568 | 34096.1 |
| signal peptidase ii | CSX01_06800 | Not Available | Negative | 1444570 - 1445094 | 20194.5 |
| 3-dehydroquinate synthase | CSX01_06805 | Not Available | Negative | 1445094 - 1446185 | 40562.6 |
| cell division protein sepf | CSX01_06810 | Not Available | Negative | 1446255 - 1446767 | 19241.7 |
| yggs family pyridoxal phosphate-dependent enzyme | CSX01_06815 | Not Available | Negative | 1446788 - 1447492 | 26300.7 |
| hypothetical protein | CSX01_06820 | Not Available | Negative | 1447503 - 1448921 | 53495.5 |
| twitching motility protein pilt | CSX01_06825 | Not Available | Negative | 1448964 - 1449386 | 15690.8 |
| d-alanyl-d-alanine carboxypeptidase | CSX01_06830 | Not Available | Negative | 1449453 - 1450427 | 34989.9 |
| methylglyoxal synthase | CSX01_06835 | Not Available | Negative | 1450420 - 1450815 | 14642.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
