Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygiq family radical sam protein | CSX01_06640 | Not Available | Positive | 1418183 - 1420123 | 73850.4 |
| rna pseudouridine synthase | CSX01_06645 | Not Available | Positive | 1420092 - 1421027 | 35276.4 |
| holliday junction resolvase recu | CSX01_06650 | Not Available | Positive | 1421014 - 1421550 | 20950.1 |
| atp phosphoribosyltransferase regulatory subunit | CSX01_06655 | Not Available | Positive | 1421627 - 1422622 | 37393.5 |
| atp phosphoribosyltransferase | CSX01_06660 | Not Available | Positive | 1422612 - 1423268 | 24425.8 |
| histidinol dehydrogenase | CSX01_06665 | Not Available | Positive | 1423255 - 1424547 | 46938.0 |
| imidazoleglycerol-phosphate dehydratase hisb | CSX01_06670 | Not Available | Positive | 1424659 - 1425255 | 21943.4 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp pyrophosphatase | CSX01_06675 | Not Available | Positive | 1425274 - 1426554 | 48156.5 |
| b12-binding domain-containing radical sam protein | CSX01_06680 | Not Available | Positive | 1426559 - 1428427 | 70638.5 |
| fe-s oxidoreductase | CSX01_06685 | Not Available | Positive | 1428417 - 1429133 | 27014.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
