Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+-transporting nadh:ubiquinone oxidoreductase subunit d | CSX01_06485 | Not Available | Positive | 1390200 - 1391156 | 33724.4 |
| fmn-binding protein | CSX01_06490 | Not Available | Positive | 1391149 - 1391766 | 21077.8 |
| electron transport complex subunit rsxe | CSX01_06495 | Not Available | Positive | 1391766 - 1392632 | 30642.7 |
| electron transport complex subunit rsxa | CSX01_06500 | Not Available | Positive | 1392632 - 1393216 | 20697.1 |
| ferredoxin | CSX01_06505 | Not Available | Positive | 1393230 - 1394021 | 27270.3 |
| glutamate 5-kinase | CSX01_06510 | Not Available | Positive | 1394274 - 1395107 | 30187.8 |
| duf896 family protein | CSX01_06515 | Not Available | Positive | 1395113 - 1395331 | 8118.59 |
| 5-formyltetrahydrofolate cyclo-ligase | CSX01_06520 | Not Available | Positive | 1395312 - 1395905 | 22658.7 |
| glutamate-5-semialdehyde dehydrogenase | CSX01_06525 | Not Available | Positive | 1395902 - 1397146 | 44604.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | CSX01_06530 | Not Available | Positive | 1397165 - 1398595 | 54281.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
