Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CSX01_00425 | Not Available | Positive | 73737 - 75209 | 54038.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CSX01_00430 | Not Available | Positive | 75196 - 76089 | 32545.7 |
| rhomboid family intramembrane serine protease | CSX01_00435 | Not Available | Positive | 76190 - 76771 | 21031.0 |
| scp-2 sterol transfer family protein | CSX01_00440 | Not Available | Positive | 76774 - 77769 | 37787.1 |
| hit family protein | CSX01_00445 | Not Available | Positive | 77793 - 78209 | 15307.4 |
| hypothetical protein | CSX01_00450 | Not Available | Positive | 78231 - 79553 | 48501.5 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CSX01_00455 | Not Available | Negative | 79554 - 80618 | 38775.9 |
| two-component system response regulator | CSX01_00460 | Not Available | Positive | 80739 - 81119 | 14510.9 |
| spore cortex-lytic protein | CSX01_00465 | Not Available | Positive | 81228 - 82436 | 42408.4 |
| ornithine carbamoyltransferase | CSX01_00470 | Not Available | Positive | 82555 - 83550 | 37143.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
