Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium ion-translocating decarboxylase subunit beta | CSX01_06435 | Not Available | Positive | 1379109 - 1380257 | 39927.1 |
| oxaloacetate decarboxylase | CSX01_06440 | Not Available | Positive | 1380271 - 1381689 | 52951.6 |
| murr/rpir family transcriptional regulator | CSX01_06445 | Not Available | Positive | 1381778 - 1382692 | 33904.5 |
| aminoacetone oxidase family fad-binding enzyme | CSX01_06450 | Not Available | Positive | 1382692 - 1383921 | 44551.0 |
| (d)cmp kinase | CSX01_06455 | Not Available | Positive | 1383942 - 1384601 | 23765.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CSX01_06460 | Not Available | Positive | 1384629 - 1385474 | 31223.1 |
| 30s ribosomal protein s1 | CSX01_06465 | Not Available | Positive | 1385462 - 1386580 | 40750.5 |
| chemotaxis protein cher | CSX01_06470 | Not Available | Positive | 1386764 - 1387537 | 29952.0 |
| hypothetical protein | CSX01_06475 | Not Available | Negative | 1387613 - 1388674 | 41841.0 |
| electron transport complex subunit rsxc | CSX01_06480 | Not Available | Positive | 1388863 - 1390182 | 47343.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
