Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | CSX01_06235 | Not Available | Positive | 1334575 - 1335591 | 37439.4 |
| Trna-glu | Not Available | Not Available | Positive | 1335715 - 1335789 | Not Available |
| ribosome maturation factor rimp | CSX01_06245 | Not Available | Positive | 1335989 - 1336459 | 17709.8 |
| transcription termination/antitermination protein nusa | CSX01_06250 | Not Available | Positive | 1336486 - 1337685 | 44770.9 |
| nucleic-acid-binding protein | CSX01_06255 | Not Available | Positive | 1337685 - 1337951 | 10157.4 |
| 50s ribosomal protein l7ae | CSX01_06260 | Not Available | Positive | 1337962 - 1338243 | 9853.73 |
| translation initiation factor if-2 | CSX01_06265 | Not Available | Positive | 1338264 - 1340924 | 97223.0 |
| 30s ribosome-binding factor rbfa | CSX01_06270 | Not Available | Positive | 1340924 - 1341295 | 13838.8 |
| dhh family phosphoesterase | CSX01_06275 | Not Available | Positive | 1341343 - 1342320 | 35761.4 |
| trna pseudouridine(55) synthase trub | CSX01_06280 | Not Available | Positive | 1342320 - 1343225 | 33345.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
